Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904261.1_cds_XP_016454401.1_48433
CDS Infomation

[gene=LOC107778628] [db_xref=GeneID:107778628] [protein=NAC domain-containing protein 78-like isoform X2] [protein_id=XP_016454401.1] [location=complement(join(21196..21599,21758..21866,21957..22430,25122..25310,25666..25946,26224..26290))] [gbkey=CDS]
Sequence

ATGTCCAACTGTGAGCCACTGGCCGTTGGGGATTTCTCGGCTATTAATGAAAAACTGGCA
ATCACATGCAAGTCGAGGCTGAAAACAAGAGATTTGGAATGGTACTTCTTTAGCGTTCTT
GATAAGAAGTATGGTAATGGAGCAAGGACGAACCGAGCTACAGAAAAAGGCTACTGGAAG
ACAACTGGAAAGGATAGGGCTGTCCATCGTAATAAGTCTCAGGTTGTGGGGATGAAGAAG
ACTCTAGTTTATCACAGTGGTCGGGCTCCAAAGGGTCAGAGGACTAATTGGGTGATGCAT
GAGTACAGACTGATTGATGAGGAGTTAGATAGAGCTGGAATTCCTCAGGATGCGTTCGTG
GTATGCAGAGTCTTCCAGAAGAGTGGTGCAGGGCCGAAAAATGGGGAACAGTATGGGGCA
CCTTTTATAGAGGAGGAATGGGAGGAGGATGAGTTACAGGTGCTTCCGAAGGATGAGGCT
GCTGAGGAATTTGTATTTGATGATGATATTTATTTAGATGGAATTGAACTTGACCAGATT
CTTGGAACTGAAACAACTTTGAATAGTGCTCCTCTTCCTTTGGACTATTGTTATGGTGAA
AATGGAAGTAGTGAGGAGACAAATAACTCCTCTGATGCACAAAATTGGCTGCAGCAACCT
GACGAGCTAAAACCAATTGATCTAGCTGTTCAACAGAATGTTGATGTCGATCCAGTCATG
CATGAATATATTGGTGAATCAAGCAAGAATGTGAACTCTGAAGATGTGGATTACTTGCTT
CATGAACCAACTGTAAATGCAACTGATGACCTTCAATTTAAGGAAGAAGCTTTCCTCGAA
GCTAATGATCTTTCAAATCCCATTGAGGTTGATAGCTCTGGTTTTGACATGCTTGAGGAA
TACCTTACTTTCTTTGATGCAAATGATGATTTCCAGCATATGGGCTTTGATCCTTCAGTT
TTGTTTGGAAATGATGATCAAATTTCTGATCAAGCACTGCTGGCTGAGAAGAACATCGGC
GAGGTAACTCAGCAATTTATTGCACCCAATGAAGGGCTTGGTGAAAATAAGAATGATTTT
GCGTCATCCTCTAAACTAGAACCGACTAAATTTGGATCAGATCGTCAGTATCCATTTATG
AAGAAGGCAAGCCAGATGTTGGGCAATATTCATGCTCCTCCAGCATTTGCTTCAGAGTTC
CCTACAAAAGACGCAACTCTCCGTCTGAATTCATTATCTCAGTCATCTAGTTCAGTGCAG
GTCACTGCTGGTTTTCAAATAAGGGACACGACTGTGGGTAGCAATGGGACGGGATGGCCA
TTGGGCAAGTATGCGGATTACAACATTATCCTATCTTTTGGCATTTCACGACGTAGTGAT
GATTCTGCCATGGAGTCATTTTATAGCATTCATCCTGGAAAGACAACTTCGATCATATCA
AGGGGCTGGTTCTATTATCTCTTCTTTTCGTTCCTAATGCTTTGTATGAGCTTCAAAATT
GGGACAATTATTTGTGCCAGTTAA

Peptide Sequence

PEP ID

XP_016454401.1
PEP Infomation

PREDICTED: NAC domain-containing protein 78-like isoform X2 [Nicotiana tabacum]
Sequence

MSNCEPLAVGDFSAINEKLAITCKSRLKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWK
TTGKDRAVHRNKSQVVGMKKTLVYHSGRAPKGQRTNWVMHEYRLIDEELDRAGIPQDAFV
VCRVFQKSGAGPKNGEQYGAPFIEEEWEEDELQVLPKDEAAEEFVFDDDIYLDGIELDQI
LGTETTLNSAPLPLDYCYGENGSSEETNNSSDAQNWLQQPDELKPIDLAVQQNVDVDPVM
HEYIGESSKNVNSEDVDYLLHEPTVNATDDLQFKEEAFLEANDLSNPIEVDSSGFDMLEE
YLTFFDANDDFQHMGFDPSVLFGNDDQISDQALLAEKNIGEVTQQFIAPNEGLGENKNDF
ASSSKLEPTKFGSDRQYPFMKKASQMLGNIHAPPAFASEFPTKDATLRLNSLSQSSSSVQ
VTAGFQIRDTTVGSNGTGWPLGKYADYNIILSFGISRRSDDSAMESFYSIHPGKTTSIIS
RGWFYYLFFSFLMLCMSFKIGTIICAS

Transcript Sequence

Gene sequence data has not been registered.